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The pattern of Phosphate transporter 1 genes evolutionary divergence in Glycine maxL.
Fan,Chengming1; Wang,Xu1; Hu,Ruibo2; Wang,Yahui3; Xiao,Chaowen1; Jiang,Ying1; Zhang,Xiaomei1; Zheng,Changying3; Fu,Yong-Fu1
2013-03-20
Source PublicationBMC Plant Biology
ISSN1471-2229
Volume13Issue:1
AbstractAbstractBackgroundThe Phosphate transporter 1 (PHT1) gene family has crucial roles in phosphate uptake, translocation, remobilization, and optimization of metabolic processes using of Pi. Gene duplications expand the size of gene families, and subfunctionalization of paralog gene pairs is a predominant tendency after gene duplications. To date, experimental evidence for the evolutionary relationships among different paralog gene pairs of a given gene family in soybean is limited.ResultsAll potential Phosphate transporter 1 genes in Glycine max L. (GmPHT1) were systematically analyzed using both bioinformatics and experimentation. The soybean PHT1 genes originated from four distinct ancestors prior to the Gamma WGT and formed 7 paralog gene pairs and a singleton gene. Six of the paralog gene pairs underwent subfunctionalization, and while GmPHT1;4 paralog gene experienced pseudogenization. Examination of long-term evolutionary changes, six GmPHT1 paralog gene pairs diverged at multiple levels, in aspects of spatio-temporal expression patterns and/or quanta, phosphates affinity properties, subcellular localization, and responses to phosphorus stress.ConclusionsThese characterized divergences occurred in tissue- and/or development-specific modes, or conditional modes. Moreover, they have synergistically shaped the evolutionary rate of GmPHT1 family, as well as maintained phosphorus homeostasis at cells and in the whole plant.
KeywordPhosphate transporter 1 Gene duplication Gene divergence Phosphorus homeostasis Evolution Glycine max L.
DOI10.1186/1471-2229-13-48
Language英语
WOS IDBMC:10.1186/1471-2229-13-48
PublisherBioMed Central
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Document Type期刊论文
Identifierhttp://ir.qibebt.ac.cn/handle/337004/12549
Collection中国科学院青岛生物能源与过程研究所
Corresponding AuthorFu,Yong-Fu
Affiliation1.Institute of Crop Sciences, Chinese Academy of Agricultural Sciences; MOA Key Lab of Soybean Biology (Beijing), National K’ey Facility of Crop Gene Resource and Genetic Improvement
2.Qingdao Institute of BioEnergy and BioProcess Technology, Chinese Academy of Sciences; CAS Key Laboratory of Biofuels, Shandong Provincial Key Laboratory of Energy Genetics
3.Qingdao Agricultural University; College of Agronomy and Plant Protection
Recommended Citation
GB/T 7714
Fan,Chengming,Wang,Xu,Hu,Ruibo,et al. The pattern of Phosphate transporter 1 genes evolutionary divergence in Glycine maxL.[J]. BMC Plant Biology,2013,13(1).
APA Fan,Chengming.,Wang,Xu.,Hu,Ruibo.,Wang,Yahui.,Xiao,Chaowen.,...&Fu,Yong-Fu.(2013).The pattern of Phosphate transporter 1 genes evolutionary divergence in Glycine maxL..BMC Plant Biology,13(1).
MLA Fan,Chengming,et al."The pattern of Phosphate transporter 1 genes evolutionary divergence in Glycine maxL.".BMC Plant Biology 13.1(2013).
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