An Open-source Collaboration Environment for Metagenomics Research

QIBEBT-IR > 单细胞中心组群

	An Open-source Collaboration Environment for Metagenomics Research
	Su, X.; Ma, Y.; Yang, H.; Chang, X.; Nan, K.; Xu, J.; Ning, K.
	2011
发表期刊	.IEEE International Conference on eScience
期号	3
摘要	By analyzing metagenomic data from microbial communities, the taxonomical and functional component of hundreds of previously unknown microbial communities have been elucidated in the past few years. However, metagenomic data analyses are both data- and computation-intensive, which require extensive computational power. Most of the current metagenomic data analysis software were designed to be used on a single PC (Personal Computer), which could not match with the fast increasing number of large metagenomic projects’ computational requirements. Therefore, advanced computational environment has to be developed to cope with such needs. In this paper, we proposed an open-source collaboration environment for metagenomic data analysis, which enabled the parallel analysis of multiple metagenomic datasets at the same time. By using this collaboration environment, researchers from different locations could submit their data, collaboratively configure the analysis pipeline, and perform data analysis efficiently. As of now, more than 30 metagenomic data analysis projects have already been conducted based on this environment
关键词	Metagenomics Collaboration Environment Data- And Computation-intensive Computing
学科领域	功能基因组
收录类别	EI
语种	英语
文献类型	期刊论文
条目标识符	http://ir.qibebt.ac.cn/handle/337004/971
专题	单细胞中心组群
推荐引用方式 GB/T 7714	Su, X.,Ma, Y.,Yang, H.,et al. An Open-source Collaboration Environment for Metagenomics Research[J]. .IEEE International Conference on eScience,2011(3).
APA	Su, X..,Ma, Y..,Yang, H..,Chang, X..,Nan, K..,...&Ning, K..(2011).An Open-source Collaboration Environment for Metagenomics Research..IEEE International Conference on eScience(3).
MLA	Su, X.,et al."An Open-source Collaboration Environment for Metagenomics Research"..IEEE International Conference on eScience .3(2011).

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