Genome-Wide Analysis of Fatty Acid Desaturases in Soybean (Glycine max) | |
Chi, Xiaoyuan1; Yang, Qingli1; Lu, Yandu2; Wang, Jinyan3; Zhang, Qingfen4; Pan, Lijuan1; Chen, Mingna1; He, Yanan1; Yu, Shanlin1 | |
2011-12-01 | |
发表期刊 | PLANT MOLECULAR BIOLOGY REPORTER |
卷号 | 29期号:4页码:769-783 |
摘要 | Fatty acid desaturases can introduce double bonds into the hydrocarbon chains of fatty acids to produce unsaturated fatty acids. In the present study, 29 full-length desaturase genes were identified from soybean genome by a thorough annotation exercise. A comprehensive analysis was performed to characterize phylogeny, chromosomal locations, structures, conserved motifs, and expression patterns of those genes. The soybean genes were phylogenetically clustered into nine subfamilies with the Arabidopsis counterparts, FAB2, FAD2, FAD3, FAD5, FAD6, FAD7, FAD8, SLD1, and DES1. Twenty-nine desaturase genes were found to be distributed on at least 15 of the 20 soybean chromosomes. The gene structures and motif compositions were considerably conserved among the subfamilies. The majority of desaturase genes showed specific temporal and spatial expression patterns across different tissues and developmental stages based on microarray data analyses. The study may provide new insights into the origin and evolution of fatty acid biosynthesis pathways in higher plants. Additionally, the characterization of desaturases from soybean will lead to the identification of additional genes for genetic modification of plants to produce nutritionally important fatty acids. |
文章类型 | Article |
关键词 | Glycine Max Genome Fatty Acid Desaturase Phylogenetic Analysis |
WOS标题词 | Science & Technology ; Life Sciences & Biomedicine |
DOI | 10.1007/s11105-010-0284-z |
关键词[WOS] | GENE-EXPRESSION ANALYSIS ; LIPID BIOSYNTHESIS ; FAD2 GENE ; SEQUENCE ; CLONING ; MARKERS ; GENEVESTIGATOR ; IDENTIFICATION ; TEMPERATURE ; STABILITY |
收录类别 | SCI |
语种 | 英语 |
WOS研究方向 | Biochemistry & Molecular Biology ; Plant Sciences |
WOS类目 | Biochemical Research Methods ; Plant Sciences |
WOS记录号 | WOS:000296068700002 |
引用统计 | |
文献类型 | 期刊论文 |
条目标识符 | http://ir.qibebt.ac.cn/handle/337004/6640 |
专题 | 单细胞中心组群 |
作者单位 | 1.Shandong Peanut Res Inst, Qingdao 266100, Peoples R China 2.Chinese Acad Sci, Qingdao Inst Bioenergy & Bioproc Technol, Qingdao 266101, Peoples R China 3.Nanjing Agr Univ, Coll Hort, State Key Lab Crop Genet & Germplasm Enhancement, Nanjing 210095, Peoples R China 4.Sino Danish Renewable Energy Dev Programme, Beijing 100038, Peoples R China |
推荐引用方式 GB/T 7714 | Chi, Xiaoyuan,Yang, Qingli,Lu, Yandu,et al. Genome-Wide Analysis of Fatty Acid Desaturases in Soybean (Glycine max)[J]. PLANT MOLECULAR BIOLOGY REPORTER,2011,29(4):769-783. |
APA | Chi, Xiaoyuan.,Yang, Qingli.,Lu, Yandu.,Wang, Jinyan.,Zhang, Qingfen.,...&Yu, Shanlin.(2011).Genome-Wide Analysis of Fatty Acid Desaturases in Soybean (Glycine max).PLANT MOLECULAR BIOLOGY REPORTER,29(4),769-783. |
MLA | Chi, Xiaoyuan,et al."Genome-Wide Analysis of Fatty Acid Desaturases in Soybean (Glycine max)".PLANT MOLECULAR BIOLOGY REPORTER 29.4(2011):769-783. |
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