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Genome-Wide Analysis of Fatty Acid Desaturases in Soybean (Glycine max)
Chi, Xiaoyuan1; Yang, Qingli1; Lu, Yandu2; Wang, Jinyan3; Zhang, Qingfen4; Pan, Lijuan1; Chen, Mingna1; He, Yanan1; Yu, Shanlin1
2011-12-01
发表期刊PLANT MOLECULAR BIOLOGY REPORTER
卷号29期号:4页码:769-783
摘要

Fatty acid desaturases can introduce double bonds into the hydrocarbon chains of fatty acids to produce unsaturated fatty acids. In the present study, 29 full-length desaturase genes were identified from soybean genome by a thorough annotation exercise. A comprehensive analysis was performed to characterize phylogeny, chromosomal locations, structures, conserved motifs, and expression patterns of those genes. The soybean genes were phylogenetically clustered into nine subfamilies with the Arabidopsis counterparts, FAB2, FAD2, FAD3, FAD5, FAD6, FAD7, FAD8, SLD1, and DES1. Twenty-nine desaturase genes were found to be distributed on at least 15 of the 20 soybean chromosomes. The gene structures and motif compositions were considerably conserved among the subfamilies. The majority of desaturase genes showed specific temporal and spatial expression patterns across different tissues and developmental stages based on microarray data analyses. The study may provide new insights into the origin and evolution of fatty acid biosynthesis pathways in higher plants. Additionally, the characterization of desaturases from soybean will lead to the identification of additional genes for genetic modification of plants to produce nutritionally important fatty acids.

文章类型Article
关键词Glycine Max Genome Fatty Acid Desaturase Phylogenetic Analysis
WOS标题词Science & Technology ; Life Sciences & Biomedicine
DOI10.1007/s11105-010-0284-z
关键词[WOS]GENE-EXPRESSION ANALYSIS ; LIPID BIOSYNTHESIS ; FAD2 GENE ; SEQUENCE ; CLONING ; MARKERS ; GENEVESTIGATOR ; IDENTIFICATION ; TEMPERATURE ; STABILITY
收录类别SCI
语种英语
WOS研究方向Biochemistry & Molecular Biology ; Plant Sciences
WOS类目Biochemical Research Methods ; Plant Sciences
WOS记录号WOS:000296068700002
引用统计
被引频次:66[WOS]   [WOS记录]     [WOS相关记录]
文献类型期刊论文
条目标识符http://ir.qibebt.ac.cn/handle/337004/6640
专题单细胞中心组群
作者单位1.Shandong Peanut Res Inst, Qingdao 266100, Peoples R China
2.Chinese Acad Sci, Qingdao Inst Bioenergy & Bioproc Technol, Qingdao 266101, Peoples R China
3.Nanjing Agr Univ, Coll Hort, State Key Lab Crop Genet & Germplasm Enhancement, Nanjing 210095, Peoples R China
4.Sino Danish Renewable Energy Dev Programme, Beijing 100038, Peoples R China
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GB/T 7714
Chi, Xiaoyuan,Yang, Qingli,Lu, Yandu,et al. Genome-Wide Analysis of Fatty Acid Desaturases in Soybean (Glycine max)[J]. PLANT MOLECULAR BIOLOGY REPORTER,2011,29(4):769-783.
APA Chi, Xiaoyuan.,Yang, Qingli.,Lu, Yandu.,Wang, Jinyan.,Zhang, Qingfen.,...&Yu, Shanlin.(2011).Genome-Wide Analysis of Fatty Acid Desaturases in Soybean (Glycine max).PLANT MOLECULAR BIOLOGY REPORTER,29(4),769-783.
MLA Chi, Xiaoyuan,et al."Genome-Wide Analysis of Fatty Acid Desaturases in Soybean (Glycine max)".PLANT MOLECULAR BIOLOGY REPORTER 29.4(2011):769-783.
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